Package: PeakSegJoint
Authors@R: person(
 given = c("Toby", "Dylan"),
 family = "Hocking",
 role = c("aut", "cre"),
 email = "toby.hocking@r-project.org")
Version: 2024.12.4
License: GPL-3
URL: https://github.com/tdhock/PeakSegJoint
BugReports: https://github.com/tdhock/PeakSegJoint/issues
Title: Joint Peak Detection in Several ChIP-Seq Samples
Description: Jointly segment several ChIP-seq samples to find the peaks
        which are the same and different across samples. The fast
        approximate maximum Poisson likelihood algorithm is described
        in "PeakSegJoint: fast supervised peak detection via joint
        segmentation of multiple count data samples"
        <doi:10.48550/arXiv.1506.01286> by TD Hocking and G Bourque.
Suggests: testthat, ggplot2 (>= 2.0), microbenchmark
Depends: R (>= 2.14)
Imports: PeakError, parallel, penaltyLearning
Repository: https://tdhock.r-universe.dev
Date/Publication: 2024-12-04 20:08:55 UTC
RemoteUrl: https://github.com/tdhock/peaksegjoint
RemoteRef: HEAD
RemoteSha: 4d094840d3c8172409bb3af440e33d72ebbeac57
NeedsCompilation: yes
Packaged: 2026-06-18 09:57:42 UTC; root
Author: Toby Dylan Hocking [aut, cre]
Maintainer: Toby Dylan Hocking <toby.hocking@r-project.org>