{ "_id": "6a55de2cff0138dec5d6a01b", "Package": "FLOPART", "Type": "Package", "Title": "Functional Labeled Optimal Partitioning", "Version": "2024.6.19", "Authors@R": "c(\nperson(\"Toby Dylan\", \"Hocking\",\nemail=\"toby.hocking@r-project.org\",\nrole=c(\"aut\", \"cre\")))", "Description": "Provides an efficient 'C++' code for computing an optimal\nsegmentation model with Poisson loss, up-down constraints, and\nlabel constraints, as described by Kaufman et al. (2024)\n.", "License": "GPL-3", "RoxygenNote": "7.3.1", "VignetteBuilder": "knitr", "Repository": "https://tdhock.r-universe.dev", "Date/Publication": "2024-06-20 11:03:11 UTC", "RemoteUrl": "https://github.com/tdhock/flopart", "RemoteRef": "HEAD", "RemoteSha": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-07-14 06:53:59 UTC", "User": "root" }, "Author": "Toby Dylan Hocking [aut, cre]", "Maintainer": "Toby Dylan Hocking ", "_user": "tdhock", "_type": "src", "_file": "FLOPART_2024.6.19.tar.gz", "_fileid": "https://r2.ropensci.org/b8454971203917f3ab991d1588fa79f0fb31f32bfe3d5a56ed48bfb0f940450d", "_filesize": 440168, "_sha256": "b8454971203917f3ab991d1588fa79f0fb31f32bfe3d5a56ed48bfb0f940450d", "_expires": "2026-10-22T06:58:50.000Z", "_created": "2026-07-14T06:53:59.000Z", "_published": "2026-07-14T06:58:52.358Z", "_jobs": [ { "job": 87020067790, "time": 136, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "8302776942" }, { "job": 87020067782, "time": 131, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "8302774013" }, { "job": 87020067772, "time": 167, "config": "linux-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "8302775986" }, { "job": 87020067780, "time": 124, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8302771462" }, { "job": 87020067798, "time": 82, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "8302756165" }, { "job": 87020067783, "time": 219, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "8302805338" }, { "job": 87020067773, "time": 110, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "8302766339" }, { "job": 87020067763, "time": 243, "config": "macos-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8302813567" }, { "job": 87019527277, "time": 191, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8302723673" }, { "job": 87020067751, "time": 100, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8302762344" }, { "job": 87020067777, "time": 111, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "8302767770" }, { "job": 87020067761, "time": 93, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "8302760360" }, { "job": 87020067769, "time": 131, "config": "windows-release", "r": "4.6.1", "check": "OK", "artifact": "8302774299" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462", "_status": "success", "_upstream": "https://github.com/tdhock/flopart", "_commit": { "id": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "author": "Toby Dylan Hocking ", "committer": "Toby Dylan Hocking ", "message": "merge\n", "time": 1718881391 }, "_maintainer": { "name": "Toby Dylan Hocking", "email": "toby.hocking@r-project.org", "login": "tdhock", "description": "", "uuid": 932850 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "Rcpp", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "PeakError", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "markdown", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" } ], "_owner": "tdhock", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "alyssajs", "count": 45, "uuid": 17418045 }, { "user": "tdhock", "count": 39, "uuid": 932850 } ], "_userbio": { "uuid": 932850, "type": "user", "name": "Toby Dylan Hocking", "followers": 421 }, "_downloads": { "count": 517, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/FLOPART" }, "_devurl": "https://github.com/tdhock/flopart", "_searchresults": 3, "_topics": [ "cpp" ], "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/FLOPART.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/tdhock/flopart", "_realowner": "tdhock", "_cranurl": true, "_releases": [ { "version": "2023.8.31", "date": "2023-09-04" }, { "version": "2024.6.19", "date": "2024-06-20" } ], "_exports": [ "FLOPART", "FLOPART_data", "FLOPART_interface", "get_label_code" ], "_datasets": [ { "name": "Mono27ac", "title": "H3K27ac ChIP-seq data from one Monocyte sample", "object": "Mono27ac", "file": "Mono27ac.RData", "class": [ "list" ], "fields": [], "table": true, "tojson": true }, { "name": "Mono27ac.simple", "title": "Smaller H3K27ac ChIP-seq data from one Monocyte sample", "object": "Mono27ac.simple", "file": "Mono27ac.simple.RData", "class": [ "list" ], "fields": [], "table": true, "tojson": true } ], "_help": [ { "page": "FLOPART", "title": "Functional Labeled Optimal Partitioning", "topics": [ "FLOPART" ] }, { "page": "FLOPART_data", "title": "Convert data for input to FLOPART", "topics": [ "FLOPART_data" ] }, { "page": "FLOPART_interface", "title": "Interface to FLOPART C++ code", "topics": [ "FLOPART_interface" ] }, { "page": "get_label_code", "title": "Lookup the integer values used to represent different label types", "topics": [ "get_label_code" ] }, { "page": "Mono27ac", "title": "H3K27ac ChIP-seq data from one Monocyte sample", "topics": [ "Mono27ac" ] }, { "page": "Mono27ac.simple", "title": "Smaller H3K27ac ChIP-seq data from one Monocyte sample", "topics": [ "Mono27ac.simple" ] } ], "_readme": "https://github.com/tdhock/flopart/raw/HEAD/README.md", "_rundeps": [ "data.table", "Rcpp" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "comparison.Rmd", "filename": "comparison.html", "title": "Comparison", "engine": "knitr::knitr", "headings": [ "No label constraints" ], "created": "2023-09-01 05:12:26", "modified": "2023-09-01 05:12:26", "commits": 1 } ], "_score": 3.6989700043360187, "_indexed": true, "_nocasepkg": "flopart", "_universes": [ "tdhock" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2024.6.19", "date": "2026-07-14T06:56:25.000Z", "distro": "resolute", "arch": "aarch64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/081320e47f9177ced60d50f7eb071e08756e7869f5b32c91f6b98c2f78d58068", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.7.0", "os": "linux", "version": "2024.6.19", "date": "2026-07-14T06:56:13.000Z", "distro": "resolute", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/93f6bd09ecbaf3ab1a0434dd661ff511f588773530e551da49222b8755f6cfbd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.6.1", "os": "linux", "version": "2024.6.19", "date": "2026-07-14T06:56:22.000Z", "distro": "resolute", "arch": "aarch64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/7b7f73119c9a5c1e20d8ee8717664ba90bbd36bc9285f90aeb061fc1d1716fe1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.6.1", "os": "linux", "version": "2024.6.19", "date": "2026-07-14T06:56:11.000Z", "distro": "resolute", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/188fe7afdb55fade6c68a5103f6c8934d8fdd97eb208e99967e968a5ad3ee010", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.5.3", "os": "mac", "version": "2024.6.19", "date": "2026-07-14T06:55:29.000Z", "arch": "aarch64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/eda160f8e91f4482c2c4ce30fac3320984c515e7a2c08cff40c9bf83a4e3fe4d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.5.3", "os": "mac", "version": "2024.6.19", "date": "2026-07-14T06:57:21.000Z", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/eefddbebfd6285e144fdd9e8cb4e043e1c8a48821ca9eaf54f2718dd571473cd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.6.1", "os": "mac", "version": "2024.6.19", "date": "2026-07-14T06:55:50.000Z", "arch": "aarch64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/07f247a4b0cee0ebfed92f4630da22fe0c0075b01bb07335f78ec6c624a76e6d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.6.1", "os": "mac", "version": "2024.6.19", "date": "2026-07-14T06:57:26.000Z", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/91d7bcbb0dce8a9b0b07cd7b5d994e2fa0aee40f75331c51e38aff89afee4623", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.6.0", "os": "wasm", "version": "2024.6.19", "date": "2026-07-14T06:55:59.000Z", "arch": "emscripten", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/888c402da7244336ea3f6d7287dca4e0080aa81173a2ea488d4db3f8886adccd", "status": "success", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.7.0", "os": "win", "version": "2024.6.19", "date": "2026-07-14T06:55:30.000Z", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/87c1810a73d052ce7cac199ab02c6bb116d9c0bc616b48f3df8d332df89d47d4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.5.3", "os": "win", "version": "2024.6.19", "date": "2026-07-14T06:55:13.000Z", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/52ba2c7dfbb8e88b40e53d85668c8adf735d3bbe5cada9a8768a24f229e86a29", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" }, { "r": "4.6.1", "os": "win", "version": "2024.6.19", "date": "2026-07-14T06:55:44.000Z", "arch": "x86_64", "commit": "68498ce6a78051e748b912153fa1f67f2c43e2ed", "fileid": "https://r2.ropensci.org/d7ec26d8725992ea94c99a33df6a7b1bd1ade1edc5aaa75aaa923ae89a9a12f8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/tdhock/actions/runs/29312608462" } ] }