Package: PeakError 2023.9.4
PeakError: Compute the Label Error of Peak Calls
Chromatin immunoprecipitation DNA sequencing results in genomic tracks that show enriched regions or peaks where proteins are bound. This package implements fast C code that computes the true and false positives with respect to a database of annotated region labels.
Authors:
PeakError_2023.9.4.tar.gz
PeakError_2023.9.4.zip(r-4.5)PeakError_2023.9.4.zip(r-4.4)PeakError_2023.9.4.zip(r-4.3)
PeakError_2023.9.4.tgz(r-4.5-x86_64)PeakError_2023.9.4.tgz(r-4.5-arm64)PeakError_2023.9.4.tgz(r-4.4-x86_64)PeakError_2023.9.4.tgz(r-4.4-arm64)PeakError_2023.9.4.tgz(r-4.3-x86_64)PeakError_2023.9.4.tgz(r-4.3-arm64)
PeakError_2023.9.4.tar.gz(r-4.5-noble)PeakError_2023.9.4.tar.gz(r-4.4-noble)
PeakError_2023.9.4.tgz(r-4.4-emscripten)PeakError_2023.9.4.tgz(r-4.3-emscripten)
PeakError.pdf |PeakError.html✨
PeakError/json (API)
NEWS
| # Install 'PeakError' in R: |
| install.packages('PeakError', repos = c('https://tdhock.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tdhock/peakerror/issues
Last updated 2 years agofrom:96c7a051aa. Checks:11 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 01 2025 |
| R-4.5-win-x86_64 | OK | Mar 01 2025 |
| R-4.5-mac-x86_64 | OK | Mar 01 2025 |
| R-4.5-mac-aarch64 | OK | Mar 01 2025 |
| R-4.5-linux-x86_64 | OK | Mar 01 2025 |
| R-4.4-win-x86_64 | OK | Mar 01 2025 |
| R-4.4-mac-x86_64 | OK | Mar 01 2025 |
| R-4.4-mac-aarch64 | OK | Mar 01 2025 |
| R-4.3-win-x86_64 | OK | Mar 01 2025 |
| R-4.3-mac-x86_64 | OK | Mar 01 2025 |
| R-4.3-mac-aarch64 | OK | Mar 01 2025 |
Exports:checkChromcheckPositionsPeakErrorPeakErrorChromPeaks
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| checkChrom | checkChrom |
| checkPositions | checkPositions |
| PeakError | PeakError |
| PeakErrorChrom | PeakErrorChrom |
| Peaks | Peaks |
