Package: FLOPART 2024.6.19
FLOPART: Functional Labeled Optimal Partitioning
Provides an efficient 'C++' code for computing an optimal segmentation model with Poisson loss, up-down constraints, and label constraints, as described by Kaufman et al. (2024) <doi:10.1080/10618600.2023.2293216>.
Authors:
FLOPART_2024.6.19.tar.gz
FLOPART_2024.6.19.zip(r-4.7)FLOPART_2024.6.19.zip(r-4.6)FLOPART_2024.6.19.zip(r-4.5)
FLOPART_2024.6.19.tgz(r-4.6-x86_64)FLOPART_2024.6.19.tgz(r-4.6-arm64)FLOPART_2024.6.19.tgz(r-4.5-x86_64)FLOPART_2024.6.19.tgz(r-4.5-arm64)
FLOPART_2024.6.19.tar.gz(r-4.7-arm64)FLOPART_2024.6.19.tar.gz(r-4.7-x86_64)FLOPART_2024.6.19.tar.gz(r-4.6-arm64)FLOPART_2024.6.19.tar.gz(r-4.6-x86_64)
FLOPART_2024.6.19.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
FLOPART/json (API)
| # Install 'FLOPART' in R: |
| install.packages('FLOPART', repos = c('https://tdhock.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tdhock/flopart/issues
- Mono27ac - H3K27ac ChIP-seq data from one Monocyte sample
- Mono27ac.simple - Smaller H3K27ac ChIP-seq data from one Monocyte sample
Last updated from:68498ce6a7. Checks:13 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 128 | ||
| linux-devel-x86_64 | OK | 128 | ||
| source / vignettes | OK | 186 | ||
| linux-release-arm64 | OK | 123 | ||
| linux-release-x86_64 | OK | 121 | ||
| macos-release-arm64 | OK | 81 | ||
| macos-release-x86_64 | OK | 221 | ||
| macos-oldrel-arm64 | OK | 87 | ||
| macos-oldrel-x86_64 | OK | 158 | ||
| windows-devel | OK | 128 | ||
| windows-release | OK | 106 | ||
| windows-oldrel | OK | 125 | ||
| wasm-release | OK | 102 |
Exports:FLOPARTFLOPART_dataFLOPART_interfaceget_label_code
Dependencies:data.tableRcpp
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Functional Labeled Optimal Partitioning | FLOPART |
| Convert data for input to FLOPART | FLOPART_data |
| Interface to FLOPART C++ code | FLOPART_interface |
| Lookup the integer values used to represent different label types | get_label_code |
| H3K27ac ChIP-seq data from one Monocyte sample | Mono27ac |
| Smaller H3K27ac ChIP-seq data from one Monocyte sample | Mono27ac.simple |
